@incollection{, 5D3530786A389B13181C63BD772A3009 , author={{}}, journal={{}}, journal={{}}, address={Cambridge, United States}, publisher={Global Journals Organisation} } @incollection{b0, , booktitle={{Growth of Listeria monocytogenes in foods. FDA. Available online: URL}} , booktitle={{Listeria monocytogenes risk assessment. Appendix}} , year={2022} 8 7 } @incollection{b1, , title={{Listeria monocytogenes faecal carriage is common and depends on the gut microbiota}} , author={{ LHafner } and { MPichon } and { CBurucoa } and { ShaNusser } and { AMoura } and { MGarcia-Garcera } and { MLecuit }} 10.1038/s41467-021-27069-y , journal={{Nat Commun}} , year={2021} } @book{b2, , title={{RASFF -the Rapid Alert System for Food and Feed. Available online: URL}} , year={2022} 7 } @book{b3, , title={{Available online: URL www}} , year={2022} , publisher={World Health Organization. Listeriosis} 7 } @incollection{b4, , title={{Concurrent conditions and human listeriosis}} , author={{ PMook } and { O'Brien } and { SJGillespie } and { IA }} 10.3201/eid1701.101174 , journal={{Emerg Infect Dis}} , year={1999-2009. 2011} , address={England} } @incollection{b5, , title={{Incidence of listeriosis and related mortality among groups at risk of acquiring listeriosis}} , author={{ VGoulet } and { MHebert } and { CHedberg } and { ELaurent } and { VVaillant } and { DeValk } and { HDesenclos } and { JC }} 10.1093/cid/cir902 , journal={{Clin Infect Dis}} , year={2012} } @incollection{b6, , title={{Immune system dysfunction in the elderly}} , author={{ EFuentes } and { MFuentes } and { MAlarcón } and { IPalomo }} 10.1590/0001-3765201720160487 , journal={{An Acad Bras Cienc}} , year={2017} } @incollection{b7, , title={{Decreased levels of helper T cells: a possible cause of immunodeficien}} , author={{ VSridama } and { FPacini } and { SLYang } and { AMoawad } and { MReilly } and { LJDegroot }} 10.1056/NEJM198208053070606 , journal={{N Engl J Med}} , year={1982} } @incollection{b8, , title={{Gastrointestinal complications in pregnancy}} , author={{ AVanagunas }} 10.3843/GLOWM.10172 , journal={{Glob. libr. women's med}} , year={2008} } @incollection{b9, , title={{The Role of the gastrointestinal mucus system in intestinal homeostasis: implications for neurological disorders}} , author={{ MHerath } and { SHosie } and { JCBornstein } and { AEFranks } and { Hill-YardinEl }} 10.3389/fcimb.2020.00248 , journal={{Front Cell Infect Microbiol}} , year={2020} } @incollection{b10, , title={{Mechanisms of infectious diarrhea}} , author={{ UNavaneethan } and { RAGiannella }} 10.1038/ncpgasthep1264 , journal={{Nat Clin Pract Gastroenterol Hepatol}} , year={2008} } @incollection{b11, , title={{Valid publication of the names of forty-two phyla of prokaryotes}} , author={{ AOren } and { GMGarrity }} 10.1099/ijsem.0.005056 , journal={{Int J Syst Evol Microbiol}} , year={2021} } @incollection{b12, , title={{Host remodeling of the gut microbiome and metabolic changes during pregnancy}} , author={{ OKoren } and { JKGoodrich } and { TCCullender } and { ASpor } and { KLaitinen } and { HKBäckhed } and { AGonzalez } and { JJWerner } and { LTAngenent } and { RKnight } and { FBäckhed } and { EIsolauri } and { SSalminen } and { RELey }} 10.1016/j.cell.2012.07.008 , journal={{Cell}} , year={2012} } @incollection{b13, , title={{Effects of stress on the mucus-microbial interactions in the gut}} , author={{ JHe } and { HGuo } and { WZheng } and { WYao }} 10.2174/1389203719666180514152406 , journal={{Curr Protein Pept Sci}} , year={2019} } @incollection{b14, , title={{Antibiotic-driven dysbiosis mediates intraluminal agglutination and alternative segregation of Enterococcus faecium from the intestinal epithelium}} , author={{ APHendrickx } and { JTop } and { JRBayjanov } and { HKemperman } and { MRRogers } and { FLPaganelli } and { MJBonten } and { RJWillems }} 10.1128/mBio.01346-15 , journal={{mBio}} , year={2015} } @incollection{b15, , title={{Epidemiology and clinical manifestations of Listeria monocytogenes infection}} , author={{ WFSchlech }} 10.1128/microbiolspec.GPP3-0014-2018 , journal={{Microbiol Spectr}} , year={2019} } @incollection{b16, , title={{}} , journal={{London Journal of Research in Science: Natural and Formal}} } @incollection{b17, , title={{Investigation of an outbreak of listeriosis: new hypotheses for the etiology of epidemic Listeria monocytogenes infections}} , author={{ BSchwartz } and { DHexter } and { CVBroome } and { AWHightower } and { RBHirschhorn } and { JDPorter } and { PSHayes } and { WFBibb } and { BLorber } and { DGFaris }} 10.1093/infdis/159.4.680 , journal={{J Infect Dis}} , year={1989} } @incollection{b18, , title={{Respiratory viral infection-induced microbiome alterations and secondary bacterial pneumonia}} , author={{ SHanada } and { MPirzadeh } and { KYCarver } and { JCDeng }} 10.3389/fimmu.2018.02640 , journal={{Front Immunol}} , year={2018} } @incollection{b19, , title={{Pulmonary insults exacerbate susceptibility to oral Listeria monocytogenes infection through the production of IL-10 by NK cells}} , author={{ NBortell } and { ERAguilera } and { LLLenz }} 10.1371/journal.ppat.1009531 , journal={{PLoS Pathog}} , year={2021} } @book{b20, , title={{Origin of SARS-CoV-2}} } @incollection{b21, , title={{Evidence for gastrointestinal infection of SARS-CoV-2}} , author={{ FXiao } and { MTang } and { XZheng } and { YLiu } and { XLi } and { HShan }} 10.1053/j.gastro.2020.02.055 , journal={{Gastroenterology}} , year={2020} } @incollection{b22, , title={{Gastrointestinal symptoms associated with COVID-19: impact on the gut microbiome}} , author={{ SVillapol }} 10.1016/j.trsl.2020.08.004 , journal={{Transl Res}} , year={2020} } @incollection{b23, , title={{The protein expression profile of ACE2 in human tissues}} , author={{ FHikmet } and { LMéar } and { AEdvinsson } and { PMicke } and { MUhlén } and { CLindskog }} 10.15252/msb.20209610 , journal={{Mol Syst Biol}} , year={2020} } @incollection{b24, , title={{The cross-talk between gut microbiota and lungs in common lung diseases}} , author={{ DZhang } and { SLi } and { NWang } and { HYTan } and { ZZhang } and { YFeng }} 10.3389/fmicb.2020.00301 , journal={{Front Microbiol}} , year={2020} } @incollection{b25, , title={{The gut-lung axis in health and respiratory diseases: a place for inter-organ and inter-kingdom crosstalks}} , author={{ REnaud } and { RPrevel } and { ECiarlo } and { FBeaufils } and { GWieërs } and { BGuery } and { LDelhaes }} 10.3389/fcimb.2020.00009 , journal={{Front Cell Infect Microbiol}} , year={2020} } @incollection{b26, , title={{Analysis of sporadic cases of invasive listeriosis in a metropolis}} , author={{ OVoronina } and { ITartakovsky } and { NYuyshchuk } and { NRyzhova } and { MKunda } and { EAksenova } and { AKutuzova } and { AMelkumyan } and { TKarpova } and { OGruzdeva }} 10.36233/0372-9311-2020-97-6-3 , journal={{J. Microbiol. Epidemiol. Immunobiol. = Zhurnal Mikrobiol. èpidemiologii i Immunobiol}} , year={2020} } @incollection{b27, , title={{Listeria monocytogenes lineages: genomics, evolution, ecology, and phenotypic characteristics}} , author={{ RHOrsi } and { HCBakker } and { MWiedmann }} 10.1016/j.ijmm.2010.05.002 , journal={{Int J Med Microbiol}} , year={2011} } @incollection{b28, , title={{Neutralizing activity of sera from Sputnik V-vaccinated people against variants of concern (VOC: B.1.1.7, B.1.351, P.1, B.1.617.2, B.1.617.3) and Moscow endemic SARS-CoV-2 variants}} , author={{ VAGushchin } and { IVDolzhikova } and { AMShchetinin } and { ASOdintsova } and { AESiniavin } and { MANikiforova } and { AAPochtovyi } and { EVShidlovskaya } and { NAKuznetsova } and { OABurgasova } and { LVKolobukhina } and { AAIliukhina } and { AVKovyrshina } and { AGBotikov } and { AVKuzina } and { DMGrousova } and { AITukhvatulin } and { DVShcheblyakov } and { OVZubkova } and { OVKarpova } and { OLVoronina } and { NNRyzhova } and { EIAksenova } and { MSKunda } and { DALioznov } and { DMDanilenko } and { ABKomissarov } and { APTkachuck } and { DYLogunov } and { ALGintsburg }} 10.3390/vaccines9070779 , journal={{Vaccines (Basel)}} , year={2021} } @book{b29, , title={{}} , author={{ AALatif } and { JLMullen } and { MAlkuzweny } and { GTsueng } and { MCano } and { EHaag } and { JZhou } and { MZeller } and { EHufbauer } and { NMatteson } and { WuCh } and { KGAndersen } and { AISu } and { KGangavarapu } and { LDHughes }} , year={18 July 2022} Center for Viral Systems Biology. Moscow City , note={Russia Variant Report} , note={outbreak.info, (available at} } @book{b30, , author={{ GVKlink } and { KSafina } and { ENabieva } and { NShvyrev } and { SGarushyants } and { EAlekseeva } and { ABKomissarov } and { DMDanilenko } and { AAPochtovyi } and { EVDivisenko } and { LAVasilchenko } and { EVShidlovskaya } and { Na;Kuznetsova } and { DLioznov } and { VAGushchin } and { VShchur } and { GABazykin }} 10.1101/2021.12.02.21267168 , title={{Coronavirus Russian Genetics Initiative (CoRGI) Consortium Samoilov AE, Neverov AD, Popova AV, Fedonin GG, CRIE Consortium Akimkin VG}} , year={2021} , note={The rise and spread of the SARS-CoV-2 AY.122 lineage in Russia. medRxiv. Preprint} } @incollection{b31, , title={{Listeriosis: genotyping as a key for identification a possible source of infection}} , author={{ OLVoronina } and { MSKunda } and { NNRyzhova } and { AVKutuzova } and { EIAksenova } and { TIKarpova } and { ISTartakovskij } and { NDYushchuk } and { EAKlimova } and { GNKaretkina } and { ChemerisOyu } and { OAGruzdeva } and { ARMelkumyan }} 10.36488/cmac.2019.4.261273 , journal={{Orlova London Journal of Research in Science: Natural and Formal OE}} , year={2019} , note={Clinical Microbiology and Antimicrobial Chemotherapy} } @incollection{b32, , title={{Retrospective study of Listeria monocytogenes isolated in the territory of inner Eurasia from 1947 to 1999}} , author={{ EKPsareva } and { IYEgorova } and { EALiskova } and { IVRazheva } and { NAGladkova } and { EVSokolova } and { EAPotemkin } and { PAZhurilov } and { TVMikhaleva } and { AABlokhin } and { YMChalenko } and { DVKolbasov } and { S?Ermolaeva }} 10.3390/pathogens8040184 , journal={{Pathogens}} , year={2019} } @incollection{b33, , title={{Genetically related Listeria monocytogenes strains isolated from lethal human cases and wild animals}} , author={{ RAdgamov } and { EZaytseva } and { JMThiberge } and { SBrisse } and { SErmolaeva }} , booktitle={{Genetic Diversity in Microorganisms, Caliskan M}} , year={2012} } @incollection{b34, , title={{Regularities of the ubiquitous polyhostal microorganisms selection by the example of three taxa}} , author={{ OLVoronina } and { MSKunda } and { NNRyzhova } and { EIAksenova } and { ANSemenov } and { MAKurnaeva } and { AnanyinaYuv } and { VGLunin } and { ALGintsburg }} 10.1134/S0026893315030176 , journal={{Molecular Biology}} , year={2015} } @incollection{b35, , title={{Molecular-genetic characteristics of polyresistant Listeria monocytogenes strains and identification of new sequence types}} , author={{ EIAstashkin } and { EAAlekseeva } and { VNBorzenkov } and { AAKislichkina } and { TNMukhina } and { MEPlatonov } and { EASvetoch } and { APShepelin } and { NKFursova }} 10.3103/S0891416821040029 , journal={{Mol. Genet. Microbiol. Virol}} , year={2021} } @incollection{b36, , title={{Internalins: a complex family of leucine-rich repeat-containing proteins in Listeria monocytogenes}} , author={{ HBierne } and { CSabet } and { NPersonnic } and { PCossart }} 10.1016/j.micinf.2007.05.003 , journal={{Microbes Infect}} , year={2007} } @incollection{b37, , title={{Listeriosis and the COVID-19 pandemic}} , author={{ EAKlimova } and { OLVoronina } and { GNKaretkina } and { EAPosukhovsky } and { NNRyzhova } and { MSKunda } and { EIAksenova } and { AVKutuzova } and { TIKarpova } and { ISTartakovsky } and { PokidyshevaAyu } and { TVPronina } and { ARMelkumyan } and { OEOrlova } and { ENBurmistrova } and { AASyrochev } and { SVSmetanina } and { NDYushchuk }} 10.33029/2305-3496-2022-11-1-102-112 , journal={{Infectious Diseases: News, Opinions, Training}} , year={2022} } @incollection{b38, , title={{Making sense of the biodiversity and virulence of Listeria monocytogenes}} , author={{ ODisson } and { AMoura } and { MLecuit }} 10.1016/j.tim.2021.01.008 , journal={{Trends Microbiol}} , year={2021} } @incollection{b39, , title={{Uncovering Listeria monocytogenes hypervirulence by harnessing its biodiversity}} , author={{ MMMaury } and { YHTsai } and { CCharlier } and { MTouchon } and { VChenal-Francisque } and { ALeclercq } and { ACriscuolo } and { CGaultier } and { SRoussel } and { ABrisabois } and { ODisson } and { EpcRocha } and { SBrisse } and { MLecuit }} 10.1038/ng.3501 , journal={{Nat Genet}} , year={2016} } @incollection{b40, , title={{Virulence and pathogenesis}} , author={{ RAWeiss }} 10.1016/s0966-842x(02)02391-0 , journal={{Trends Microbiol}} , year={2002} } @incollection{b41, , title={{VFDB: a reference database for bacterial virulence factors}} , author={{ LChen } and { JYang } and { JYu } and { ZYao } and { LSun } and { YShen } and { JinQ }} 10.1093/nar/gki008 , journal={{Nucleic Acids Res}} , year={2005} } @incollection{b42, , title={{Gp96 is a receptor for a novel Listeria monocytogenes virulence factor, Vip, a surface protein}} , author={{ DCabanes } and { SSousa } and { ACebriá } and { MLecuit } and { García-DelPortillo } and { FCossart } and { P }} 10.1038/sj.emboj.7600750 , journal={{EMBO J}} , year={2005} } @incollection{b43, , title={{New aspects regarding evolution and virulence of Listeria monocytogenes revealed by comparative genomics and DNA arrays}} , author={{ MDoumith } and { CCazalet } and { NSimoes } and { LFrangeul } and { CJacquet } and { FKunst } and { PMartin } and { PCossart } and { PGlaser } and { CBuchrieser }} 10.1128/IAI.72.2.1072-1083.2004 , journal={{Infection and immunity}} , year={2004} } @incollection{b44, , title={{Heavy metal resistance determinants of the foodborne pathogen Listeria monocytogenes}} , author={{ CParsons } and { SLee } and { SKathariou }} 10.3390/genes10010011 , journal={{Genes (Basel)}} , year={2018} } @incollection{b45, , title={{Heat resistance mediated by pLM58 plasmid-borne ClpL in Listeria monocytogenes}} , author={{ APöntinen } and { MAalto-Araneda } and { MLindström } and { HKorkeala }} 10.1128/mSphere.00364-17 , journal={{mSphere}} , year={2017} } @incollection{b46, , title={{Plasmid addiction genes of bacteriophage P1: doc, which causes cell death on curing of prophage, and phd, which prevents host death when prophage is retained}} , author={{ MLebrun } and { JLoulergue } and { EChaslus-Dancla } and { A ;Audurier } and { HLehnherr } and { EMaguin } and { SJafri } and { MBYarmolinsky }} 10.1128/aem.58.9.3183-3186.1992 doi: 10.1006/jmbi.1993.1521 , journal={{London Journal of Research in Science: Natural and Formal}} 47 , year={1992. 1993} , note={J Mol Biol} } @incollection{b47, , title={{A Post-segregational killing mechanism for maintaining plasmid PMF1 in its Myxococcus fulvus host}} , author={{ YJLi } and { YLiu } and { ZZhang } and { XJChen } and { YGong } and { YZLi }} 10.3389/fcimb.2018.00274 , journal={{Front Cell Infect Microbiol}} , year={2018} } @incollection{b48, , title={{The influence of the toxin/antitoxin mazEF on growth and survival of Listeria monocytogenes under stress}} , author={{ TDCurtis } and { ITakeuchi } and { LGram } and { GMKnudsen }} 10.3390/toxins9010031 , journal={{Toxins}} , year={2017} , address={Basel} } @incollection{b49, , title={{Metal ion homeostasis in Listeria monocytogenes and importance in host-pathogen interactions}} , author={{ HEJesse } and { ISRoberts } and { JSCavet }} 10.1016/bs.ampbs.2014.08.003 , journal={{Adv Microb Physiol}} , year={2014} } @incollection{b50, , title={{The Dps-like protein Fri of Listeria monocytogenes promotes stress tolerance and intracellular multiplication in macrophage-like cells}} , author={{ KNOlsen } and { MHLarsen } and { CgmGahan } and { BKallipolitis } and { XAWolf } and { RRea } and { CHill } and { HIngmer }} 10.1099/mic.0.27552-0 , journal={{Microbiology (Reading)}} , year={2005} } @incollection{b51, , title={{Formation, prevention, and repair of DNA damage by iron/hydrogen peroxide}} , author={{ ESHenle } and { SLinn }} 10.1074/jbc.272.31.19095 , journal={{J Biol Chem}} , year={1997} } @incollection{b52, , title={{L-rhamnosylation of Listeria monocytogenes wall teichoic acids promotes resistance to antimicrobial peptides by delaying interaction with the membrane}} , author={{ FCarvalho } and { MLAtilano } and { RPombinho } and { GCovas } and { RLGallo } and { SRFilipe } and { SSousa } and { DCabanes }} 10.1371/journal.ppat.1004919 , journal={{PLoS Pathog}} , year={2015} } @incollection{b53, , title={{Plasmidome of Listeria spp.-The repA-family business}} , author={{ CChmielowska } and { DKorsak } and { EChapkauskaitse } and { PDecewicz } and { RLasek } and { MSzuplewska } and { DBartosik }} 10.3390/ijms221910320 , journal={{Int J Mol Sci}} , year={2021} } @incollection{b54, , title={{Closed genome sequences of 28 foodborne pathogens from the CFSAN verification set, determined by a combination of long and short reads}} , author={{ NGonzalez-Escalona } and { GJKastanis } and { RTimme } and { DRoberson } and { MBalkey } and { SMTallent }} 10.1128/MRA.00152-20 , journal={{Microbiol Resour Announc}} , year={2020} } @incollection{b55, , title={{A validation approach of an end-to-end whole genome sequencing workflow for source tracking of Listeria monocytogenes and Salmonella enterica}} , author={{ ACPortmann } and { CFournier } and { JGimonet } and { CNgom-Bru } and { CBarretto } and { LBaert }} 10.3389/fmicb.2018.00446 , journal={{Front Microbiol}} , year={2018} } @incollection{b56, , title={{100K pathogen genome project: 306 Listeria draft genome sequences for food safety and public health}} , author={{ PChen } and { NKong } and { BHuang } and { KThao } and { WNg } and { DBStorey } and { NArabyan } and { AFoutouhi } and { SFoutouhi } and { BCWeimer }} 10.1128/genomeA.00967-16 , journal={{Genome Announc}} , year={2017} } @incollection{b57, , title={{Comparative analysis of plasmids in the genus Listeria}} , author={{ CKuenne } and { SVoget } and { JPischimarov } and { SOehm } and { AGoesmann }} 10.1371/journal.pone.0012511 , journal={{PLoS ONE}} , year={2010} } @incollection{b58, , title={{Whole-genome sequences of two Listeria monocytogenes serovar 1/2a strains responsible for a severe listeriosis outbreak in central Italy}} , author={{ MOrsini } and { ACornacchia } and { CPatavino } and { MTorresi } and { PCentorame } and { VAAcciari } and { ARuolo } and { MMarcacci } and { MAncora } and { DiDomenico } and { M }} , journal={{Genome Announc}} 6 , year={2018} } @incollection{b59, , title={{Transcriptome sequencing of Listeria monocytogenes reveals major gene expression changes in response to lactic acid stress exposure but a less pronounced response to oxidative stress}} , author={{ BWCortes } and { ALNaditz } and { JMAnast } and { SSchmitz-Esser }} 10.3389/fmicb.2019.03110 , journal={{Front Microbiol}} , year={2020} } @incollection{b60, , title={{Expanded microbial genome coverage and improved protein family annotation in the COG database}} , author={{ MYGalperin } and { KSMakarova } and { YIWolf } and { EVKoonin }} 10.1093/nar/gku1223 , journal={{Nucleic Acids Res}} , year={2015} } @incollection{b61, , title={{TransportDB 2.0: a database for exploring membrane transporters in sequenced genomes from all domains of life}} , author={{ LDElbourne } and { SGTetu } and { KAHassan } and { ITPaulsen }} 10.1093/nar/gkw1068 , journal={{London Journal of Research in Science: Natural and Formal}} , year={2017} , note={Nucleic Acids Res} } @incollection{b62, , title={{Secondary active transporters}} , author={{ PDBosshart } and { DFotiadis }} 10.1007/978-3-030-18768-2_9 , booktitle={{Bacterial Cell Walls and Membranes}} , editor={ AKuhn } , publisher={Springer Nature} , year={2019} , note={Switzerland AG} } @incollection{b63, , title={{Comparative proteomic analysis of Listeria monocytogenes tolerance to bile stress}} , author={{ QZhou } and { QZhang } and { HQu } and { WLi } and { FFeng } and { QLuo }} 10.1007/s13213-012-0452-5 , journal={{Ann Microbiol}} , year={2013} } @incollection{b64, , title={{Structure of phenylalanyl-tRNA synthetase from Thermus the rmophilus}} , author={{ LMosyak } and { LReshetnikova } and { YGoldgur } and { MDelarue } and { MGSafro }} 10.1038/nsb0795-537 , journal={{Nat Struct Biol}} , year={1995} } @book{b65, , title={{Chapter 2.26 -Nucleic Acids (Deoxyribonucleic Acid and Ribonucleic Acid)}} , author={{ EESwayze } and { RHGriffey } and { CFBennett }} 10.1016/B0-08-045044-X/00065-1 , editor={Taylor J.B., Triggle D.J.} , year={2007} , publisher={Elsevier} , address={Amsterdam, London} , note={In Comprehensive Medicinal Chemistry II} } @incollection{b66, , title={{The delta subunit of DNA polymerase III holoenzyme serves as a sliding clamp unloader in Escherichia coli}} , author={{ FPLeu } and { MMHingorani } and { JTurner } and { O'Donnell } and { M }} 10.1074/jbc.M005495200 , journal={{J Biol Chem}} , year={2000} } @incollection{b67, , title={{SbcCD reg-ulation and localization in Escherichia coli}} , author={{ EDarmon } and { MALopez-Vernaza } and { ACHelness } and { ABorking } and { EWilson } and { ZThacker } and { LWardrope } and { DRLeach }} 10.1128/JB.00489-07 , journal={{J Bacteriol}} , year={2007} } @incollection{b68, , title={{Stoichiometry and perturbation studies of the LiaFSR system of Bacillus subtilis}} , author={{ KSchrecke } and { SJordan } and { TMascher }} 10.1111/mmi.12130 , journal={{Mol Mi-crobiol}} , year={2013} } @incollection{b69, , title={{Protein arginine phosphorylation in organisms}} , author={{ BHuang } and { ZZhao } and { YZhao } and { SHuang }} 10.1016/j.ijbiomac.2021.01.015 , journal={{Int J Biol Macromol}} , year={2021} } @incollection{b70, , title={{Overcoming inefficient cellobiose fermentation by cellobiose phosphorylase in the presence of xylose}} , author={{ KChomvong } and { VKordi? } and { XLi } and { SBauer } and { AEGillespie } and { SJHa } and { EJOh } and { JMGalazka } and { YSJin } and { JHCate }} 10.1186/1754-6834-7-85 , journal={{Biotechnology Biofuels}} , year={2014} } @incollection{b71, , title={{Operator recognition by the ROK transcription factor family members, NagC and Mlc}} , author={{ DBréchemier-Baey } and { LDomínguez-Ramírez } and { JOberto } and { JPlumbridge }} 10.1093/nar/gku1265 , journal={{Nucleic Acids Res}} , year={2015} } @incollection{b72, , title={{The lung-gut axis during viral respiratory infections: the impact of gut dysbiosis on secondary disease outcomes}} , author={{ VSencio } and { MGMachado } and { FTrottein }} 10.1038/s41385-020-00361-8 , journal={{Mucosal Immunol}} , year={2021} } @incollection{b73, , title={{Characterization and genetic diversity of Listeria monocytogenes isolated from cattle abortions in Latvia}} , author={{ ??teingolde } and { IMeistere } and { JAvsejenko } and { J?ibilds } and { IBerg?pica } and { MStreiki?a } and { SGradovska } and { LAlksne } and { SRoussel } and { MTer-Entjeva } and { ABÄ?"rzi?? }} 10.3390/vetsci8090195 , journal={{Vet Sci}} , year={2021} } @incollection{b74, , author={{ ZKubicová } and { SRoussel } and { BFélix } and { LCabanová }} 10.3389/fmicb.2021.729050 , booktitle={{Genomic diversity of Listeria monocytogenes isolates from Slovakia}} , year={2010 to 2020. 2021} } @incollection{b75, , title={{Vacuum-packed steak tartare: prevalence of Listeria monocytogenes and evaluation of efficacy of Listex TM P100}} , author={{ LHluchanova } and { KKorena } and { HJuricova }} 10.3390/foods11040533 , journal={{Foods}} , year={2022} } @incollection{b76, , title={{Isolate-based surveillance of Listeria monocytogenes by whole genome sequencing in Austria}} , author={{ ACabal } and { APietzka } and { SHuhulescu } and { FAllerberger } and { WRuppitsch } and { DSchmid }} 10.3389/fmicb.2019.02282 , journal={{Front. Microbiol}} , year={2019} } @incollection{b77, , title={{A nosocomial outbreak of invasive listeriosis in an Italian hospital: epidemiological and genomic features}} , author={{ VRussini } and { MSpaziante } and { TZottola } and { AGFermani } and { DiGiampietro } and { GBlanco } and { GFabietti } and { PMarrone } and { RParisella } and { RParrocchia } and { SBossù } and { TBilei } and { S } and { DeMarchis } and { ML }} 10.3390/pathogens10050591 , journal={{Pathogens}} , year={2021} } @incollection{b78, , title={{Unraveling the emergence and population diversity of Listeria monocytogenes in a newly built meat facility through whole genome sequencing}} , author={{ AAlvarez-Molina } and { JFCobo-Díaz } and { MLópez } and { MPrieto } and { MDe Toro } and { A ;Alvarez-Ordóñez } and { MMMaury } and { HBracq-Dieye } and { LHuang } and { GVales } and { MLavina } and { PThouvenot } and { ODisson } and { ALeclercq } and { SBrisse } and { MLecuit }} 10.1016/j.ijfoodmicro.2021 doi: 10.1038/s41467-019-10380-0 , journal={{London Journal of Research in Science: Natural and Formal}} 80 , year={2021. 2019} , note={Nat Commun} } @incollection{b79, , title={{Maternal-neonatal listeriosis}} , author={{ CCharlier } and { ODisson } and { MLecuit }} 10.1080/21505594.2020.1759287 , journal={{Virulence}} , year={2020} } @incollection{b80, , title={{Benzalkonium tolerance genes and outcome in Listeria monocytogenes meningitis}} , author={{ PHKremer } and { JALees } and { MMKoopmans } and { BFerwerda } and { AWArends } and { MMFeller } and { KSchipper } and { SMValls } and { AVan Der Ende } and { MCBrouwer } and { DVan De Beek } and { SDBentley }} 10.1016/j.cmi.2016.12.008 , journal={{Clin Microbiol Infect}} , year={2017} } @incollection{b81, , title={{Development of a multilocus sequence typing method for analysis of Listeria monocytogenes clones}} , author={{ CSalcedo } and { LArreaza } and { BAlcala } and { LDe La Fuente } and { JAVázquez }} 10.1128/jcm.41.2.757-762.2003 , journal={{J Clin Microbiol}} , year={2003} } @incollection{b82, , title={{A new perspective on Listeria monocytogenes evolution}} , author={{ MRagon } and { TWirth } and { FHollandt } and { RLavenir } and { MLecuit } and { LeMonnier } and { ABrisse } and { S }} 10.1371/journal.ppat.1000146 , journal={{PLoS Pathog}} , year={2008} } @book{b83, , title={{Diversity of Listeria monocytogenes strains isolated from food products in the Central European part of Russia in}} , author={{ EKPsareva } and { EALiskova } and { IVRazheva } and { YKYushina } and { MAGrudistova } and { NAGladkova } and { EAPotemkin } and { PAZhurilov } and { EVSokolova } and { PAAndriyanov } and { OLVoronina } and { DVKolbasov } and { SAErmolaeva }} 10.3390/foods10112790 , year={2000-2005 and 2019-2020. 2021} , address={Basel, Switzerland} } @incollection{b84, , title={{Diversity and pathogenic potential of Listeria monocytogenes isolated from environmental sources in the Russian Federation}} , author={{ OLVoronina } and { NNRyzhova } and { MSKunda } and { MAKurnaeva } and { ANSemenov } and { EIAksenova }} , journal={{IJMER}} 5 3 , year={2015} } @incollection{b85, , title={{The CGView Server: A comparative genomics tool for circular genomes}} , author={{ JRGrant } and { PStothard }} 10.1093/nar/gkn179 , journal={{Nucleic Acids Res}} , year={2008} } @incollection{b86, , title={{The RAST Server: Rapid annotations using subsystems technology}} , author={{ RKAziz } and { DBartels } and { AABest } and { MDejongh } and { TDisz } and { RAEdwards } and { KFormsma } and { SGerdes } and { EMGlass } and { MKubal }} 10.1186/1471-2164-9-75 , journal={{BMC Genom}} , year={2008} } @incollection{b87, , title={{The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes}} , author={{ ROverbeek } and { TBegley } and { RMButler } and { JVChoudhuri } and { H-YChuang } and { MCohoon } and { VDe Crécy-Lagard } and { NDiaz } and { TDisz } and { REdwards }} 10.1093/nar/gki866 , journal={{Nucleic Acids Res}} , year={2005} } @incollection{b88, , title={{PHASTER: A better, faster version of the PHAST phage search tool}} , author={{ DArndt } and { JRGrant } and { AMarcu } and { TSajed } and { APon } and { YLiang } and { DSWishart }} 10.1093/nar/gkw387 , journal={{Nucleic Acids Res}} , year={2016} } @incollection{b89, , title={{Whole genome-based population biology and epidemiological surveillance of Listeria monocytogenes}} , author={{ AMoura } and { ACriscuolo } and { HPouseele } and { MMMaury } and { ALeclercq } and { CTarr } and { JTBjörkman } and { TDallman } and { AReimer } and { VEnouf } and { ELarsonneur } and { HCarleton } and { HBracq-Dieye } and { LSKatz } and { LJones } and { MTouchon } and { MTourdjman } and { MWalker } and { SStroika } and { TCantinelli } and { VChenal-Francisque } and { ZKucerova } and { EPRocha } and { CNadon } and { KGrant } and { EMNielsen } and { BPot } and { PGerner-Smidt } and { MLecuit } and { SBrisse }} 10.1038/nmicrobiol.2016.185 , journal={{Nat. Microbiol}} , year={2016} } @incollection{b90, , title={{BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons}} , author={{ NFAlikhan } and { NKPetty } and { BenZakour } and { NLBeatson } and { SA }} 10.1186/1471-2164-12-402 , journal={{London Journal of Research in Science: Natural and Formal}} , year={2011} , note={BMC Genomics} }